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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837630.1_cds_XP_016506672.1_19875
CDS Infomation

[gene=LOC107824428] [db_xref=GeneID:107824428] [protein=xaa-Pro dipeptidase isoform X3] [protein_id=XP_016506672.1] [location=join(52305..52328,53148..53243,53345..53494,57677..57808,64720..64847,79248..79290,79677..79760,80431..80472,80930..81000,82237..82290,82392..82497,82600..82668,83426..83569,83720..83851)] [gbkey=CDS]
Sequence

ATGCATCATTTGGGTCCTATGGAAGATATAGCAAGTGGGAAATCTATGCTCTTTGCTCCT
AGGTTACCGGCTGACTATGCTGTTTGGATGGGAGAAATAAAATCACTTACTCACTTCCAG
GCAAAGTACAAGGTTACCCAGGTCTTCTATATTGATGAGATTAAGGAAGTTTTGTCTAAT
CAGTACCAAGCGATGGGAACACCGTTGCTATTTCTCTTGCATGGGCTTAATACAGATAGC
AACAAGTACTCTAAACCAGCAGAATTTCAGGGTATTAAGAAGTTCCAGACAGATTTAAAC
ACATTGCATCCGATCGTGACTGAATGCCGTGTTATAAAGTCCAACTTAGAACTTGCTCTC
ATTCAATTTGCCAATGACATAAGCACTGAAGCTCATGTTGAGGTTATGAGGAAAACAAAA
GTGGGGATGAAAGAGTATCAGTTAGAAAGCATGTTTCTTCACCACACCTACATGTATGGT
GGTTGTAGGCATTGTTCATACACATGCATATGTGCTACTGGCGACAATAGTGCTGTACTC
CATTATGGTCATGCAGCAGCTCCAAATGACAAGACATTGCGAGAGGGAGATATGGCTCTT
CTTGATATGGGAGCTGAATACCACTTTTATGGGTCCGACATAACTTGTTCCTTTCCAGTA
AATGGGAAATTTACTCGTGACCAGTCACTTGTATATACTGCTGTCCTCGACGCTCACGAT
GCTGTCATTTCTGCCATGAGCCCTGGAGTGAGCTGGGTCGATATGCATAAATTAGCTGAA
AAGATCATTTTGGAATCACTGAAGAAAGGGCACCTACTTGTTGGGGATGTTGATAAAATG
ATGACCGAGCGACTTGGTGCTGTTTTCATGCCTCATGGGTTGGGGCACCTTCTTGGAATT
GATACTCATGATCCTGGGGGTTACTTGAAGGGAGCTGAAAGACCAAAAGAACCTGGATTG
AGCTCTCTACGTACTAGCAGAAAGCTCTTAGAGGGAATGGTGATCACTGTAGAGCCTGGT
TGTTACTTCATTGATGCCTTACTACTTCCTGCATTGGAGAGTCCGTCGGTGTCTGAGTTT
TTCAATCATGGAGAGATCAACAGATTTAGAGCTTTTGGTGGAGTCAGAATTGAAAGTGAT
GTGTGTGTTACTGCCAATGGATGCATTAACATGACCAAATGTCCCCGGAAGATTGAAGAG
ATCGAGGCAGTGATGGCAGGAGTTCCTTGGCCAATCAAAAAGACGACCTTTCCTTCCGGA
AATGGACAAGTGTAA

Peptide Sequence

PEP ID

XP_016506672.1
PEP Infomation

PREDICTED: xaa-Pro dipeptidase isoform X3 [Nicotiana tabacum]
Sequence

MHHLGPMEDIASGKSMLFAPRLPADYAVWMGEIKSLTHFQAKYKVTQVFYIDEIKEVLSN
QYQAMGTPLLFLLHGLNTDSNKYSKPAEFQGIKKFQTDLNTLHPIVTECRVIKSNLELAL
IQFANDISTEAHVEVMRKTKVGMKEYQLESMFLHHTYMYGGCRHCSYTCICATGDNSAVL
HYGHAAAPNDKTLREGDMALLDMGAEYHFYGSDITCSFPVNGKFTRDQSLVYTAVLDAHD
AVISAMSPGVSWVDMHKLAEKIILESLKKGHLLVGDVDKMMTERLGAVFMPHGLGHLLGI
DTHDPGGYLKGAERPKEPGLSSLRTSRKLLEGMVITVEPGCYFIDALLLPALESPSVSEF
FNHGEINRFRAFGGVRIESDVCVTANGCINMTKCPRKIEEIEAVMAGVPWPIKKTTFPSG
NGQV

Transcript Sequence

Gene sequence data has not been registered.